Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912940.1_cds_XP_016463015.1_56179
CDS Infomation

[gene=LOC107786093] [db_xref=GeneID:107786093] [protein=protein NRT1/ PTR FAMILY 5.6-like] [protein_id=XP_016463015.1] [location=join(19068..19224,20722..20939,21320..21864,21958..22825)] [gbkey=CDS]
Sequence

ATGGATAGGATAAATATGGAGATAGAACAGGTAATGAAAGCAGAATCAGTAGAAATAGAT
GGGGAAAAATGGGTTTATGATTCTTCTATCGATCATAAAGGAAGAGTTCCTCTTAGGGAT
TCAACTGGTGTTTGGAAGGCCTCCCTCTTCATCATTGTGATTGAATTCAGCGAGAGGCTG
AGTTACTTTGGAATAGCCACAAGTTTGATCATATACCTAACAAAAGTCATCCATCAAGAC
CTCAAAACAGCAGCAAAAAGTGTGAACTACTGGTCAGGAGTTACCACTTTGATGCCATTG
CTTGGAGGCTTTCTGGCTGACGCATACTTGGGAAGATTCTCCACCGTTCTTGTCTCTTCC
ACGGTCTACTTCCTGGGCTTGCTTCTCTTGACAATGTCTAGAGTGGTCCCAAGCTTAAAA
CCTTGTGATGGTAACCTCTGTGATGAACCGAGGAAGGTCCACGAGCCAATTTTCTTCCTT
GCGATCTACTTAATCTCTCTTGGAACCGGAGGACACAAGCCTTCTCTAGAGAGCTTTGGA
GCTGATCAGTTTGATGATGGAAATCCTGAAGAAAGGAGAAAGAAGATGTCCTTTTTCAAC
TGGTGGAACTTTGGGCTATGCTGTGGCCTATTACTTGGTGTTACTCTTATCGTTTATGTC
CAAGAGCATGTTAGCTGGGCTATGGCAGACATAATACTCACAGTAGTTATGGCTTCTAGT
ATAGCCATCTTCATTGCAGGGCGGCCATCCTATCGTTATAGAAAAGCAACTGGAAGTCCA
TTAACACCCATGCTACAGGTGCTAGTAGCTGCAATTAGAAAAAGAAATCTTCATCTTCCT
TCAAATCCTTCTCATCTACACGAAGTTCCCAAGTCAGAAACTACCCAAAGGAAGCTCTTA
GGCCACACCACAAAGCTGAAGTTCCTTGATAAAGCCGCAATCCTGGATCACAGACAAGAT
TCAATAGAACAGAATGCATGGAAACTTACAACCGTGACCAAGGTGGAAGAACTGAAGCTA
CTTATCAACATGATTCCTATTTGGCTAACCACTTTACCATTTGGTATATGTGTAGCACAA
GCTGCAACTTTTTTCATAAAACAAGGCGTGACAATGAACCGGAAAATCATTCACAATTTT
GAGATTCCCCCAGCCTCAATCTATGCCCTGACAGCAGTTGGCATGATAATATCTGTCACA
ATCTATGACAAAATCCTTGTACCTATCATGAGAAGGGCAACAGGAAATGAGAGAGGCATT
AGTATTCTCCAAAGGATCGGTATTGGAATGATCTTCTCGGTTTCTAGTATGGTAGTTGCA
GCTTTGGTTGAGAGAAAGAGACTGAATGTTGTTCATAAAAATCCTTTTGAGGGTTCAGCT
TCAATGAGTGTGTTTTGGCTAGCACCACAATTCCTTATCATTGGAATAGGAGATGGGTTT
ACCCTAGTGGGATTGCAAGAATACTTCTATGACCAAGTACCCGATACCATGAGGAGCTTG
GGCATCGCACTTTACCTTAGTGTGATTGGTGCTGCAAATTTTATTAGCAGCCTCTTGATA
ACTATTGTGGATCATATCACAAAGAACAGTGGCAAGAGTTGGTTTGGGAAGGATCTAAAT
AGCAGCCGCCTTGACTATTTCTACTGGTTGCTGGCTACAATCACAGCAGTAAATTTGTGT
GTCTATGTTTTTGCTGCAAGGAGTTATACCTACAAGAATGAGCACAGCACGACAACTATA
GCTGTAGCTGATTGTGATGATGGGGATAATCGTAAAGGAATGGTTTAG

Peptide Sequence

PEP ID

XP_016463015.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana tabacum]
Sequence

MDRINMEIEQVMKAESVEIDGEKWVYDSSIDHKGRVPLRDSTGVWKASLFIIVIEFSERL
SYFGIATSLIIYLTKVIHQDLKTAAKSVNYWSGVTTLMPLLGGFLADAYLGRFSTVLVSS
TVYFLGLLLLTMSRVVPSLKPCDGNLCDEPRKVHEPIFFLAIYLISLGTGGHKPSLESFG
ADQFDDGNPEERRKKMSFFNWWNFGLCCGLLLGVTLIVYVQEHVSWAMADIILTVVMASS
IAIFIAGRPSYRYRKATGSPLTPMLQVLVAAIRKRNLHLPSNPSHLHEVPKSETTQRKLL
GHTTKLKFLDKAAILDHRQDSIEQNAWKLTTVTKVEELKLLINMIPIWLTTLPFGICVAQ
AATFFIKQGVTMNRKIIHNFEIPPASIYALTAVGMIISVTIYDKILVPIMRRATGNERGI
SILQRIGIGMIFSVSSMVVAALVERKRLNVVHKNPFEGSASMSVFWLAPQFLIIGIGDGF
TLVGLQEYFYDQVPDTMRSLGIALYLSVIGAANFISSLLITIVDHITKNSGKSWFGKDLN
SSRLDYFYWLLATITAVNLCVYVFAARSYTYKNEHSTTTIAVADCDDGDNRKGMV

Transcript Sequence

Gene sequence data has not been registered.